Age-stratified GWAS in UK Biobank identified differential enrichment of age-interaction effects that were trait-dependent, with downstream MR analyses highlighting the influence of age on the genetically predicted relationship between pulse pressure and adverse cardiovascular outcomes.
Key Findings
Results
The proportion of trait-associated SNPs with evidence for age-interaction effects varied substantially by trait.
10.3% of BMI discovery SNPs had evidence for an age-interaction effect at P < 0.05.
44.7% of pulse pressure (PP) discovery SNPs had evidence for an age-interaction effect at P < 0.05.
Age-interaction enrichment was described as 'trait dependent', suggesting different genetic architectures across traits.
The study examined BMI and three blood pressure traits: systolic, diastolic, and pulse pressure.
Results
An increased rate of change in genetically predicted pulse pressure across the age period is associated with higher susceptibility to peripheral artery disease (PAD).
Interaction odds ratio = 2.71 for the association between rate of change in genetically predicted PP and PAD.
P-value = 1.82x10-13.
95% confidence interval: 2.08-3.53.
This was identified using a modified inverse-variance weighted (IVW) MR analysis framework.
Methods
The study conducted age-stratified GWAS in 2-year age strata across individuals aged 40-69 years in the UK Biobank.
Sample sizes were up to N = 26,330 per age stratum.
Traits examined included BMI and three blood pressure traits: systolic blood pressure, diastolic blood pressure, and pulse pressure.
A meta-regression approach was used to systematically identify SNPs with evidence for age interaction effects.
Both trait-associated GWAS signals and additional loci genome-wide were examined for age-interaction effects.
Results
Modified inverse-variance weighted MR analyses highlighted the influence of age on the genetically predicted relationship between pulse pressure and adverse cardiovascular outcomes.
Cardiovascular and cardiometabolic outcomes examined included type-2 diabetes, stroke, peripheral artery disease, heart failure, coronary heart disease, and atrial fibrillation.
The modified IVW analysis incorporated SNP*Age interaction terms to assess how age modifies genetically predicted trait-outcome relationships.
Results indicated that PP showed the strongest evidence for age-varying genetic effects influencing cardiovascular disease risk among the traits studied.
The approach extends conventional MR by describing the effect of SNP*Age interaction on exposure-outcome relationships.
Background
Conventional GWAS approaches assume that genetic associations are constant across different ages, an assumption this study evaluated and found to be violated for multiple traits.
GWAS are conventionally conducted in cohorts spanning a wide age-range with the assumption of constant genetic associations.
Age-varying genetic associations have implications for the interpretation of genetic effects in downstream applications such as Mendelian randomization.
The study found differential enrichment of age-interaction effects that was trait dependent, challenging the constant-effect assumption.
All summary data generated in the project has been made accessible to the research community as a resource.
Leyden G, Pagoni P, Power G, Carslake D, Richardson T, Tilling K, et al.. (2026). An evaluation of age-varying genetic effects underlying body-mass index and blood pressure in the UK Biobank.. PLoS genetics. https://doi.org/10.1371/journal.pgen.1012080