Cardiovascular

Discovery of novel alleles in Kartagener's syndrome.

TL;DR

Whole exome sequencing of 17 Turkish adults with Kartagener's syndrome showed a high diagnostic yield, identified variants in established PCD genes including several novel alleles, and suggested candidate variants in DLEC1, DNAAF9, and EZR in one genetically unresolved patient.

Key Findings

Whole exome sequencing of a Turkish cohort of 17 adult Kartagener's syndrome patients with situs inversus yielded a high diagnostic yield.

  • The cohort comprised 17 adult patients, all with situs inversus.
  • Variants were prioritised on sequencing quality, population allele frequency, and predicted functional impact.
  • Analysis covered single-nucleotide variants, small insertions/deletions, and copy-number variations.
  • Restricting the cohort to patients with situs inversus gave a phenotype-specific context, making genes unrelated to left-right axis determination less likely to explain disease.

Pathogenic or potentially disease-associated variants were found in multiple established PCD genes.

  • Genes with variants included DNAH5, DNAI1, DNAI2, DNAAF1, DNAAF3, CFAP300, and ODAD1.
  • Several of the detected alleles were novel.
  • This expanded the variant spectrum associated with Kartagener's syndrome.

In one patient lacking biallelic variants in known PCD genes, expanded analysis identified heterozygous variants in DLEC1 and DNAAF9 plus a hemizygous copy number loss in EZR.

  • DLEC1 and DNAAF9 are cilia-associated genes.
  • EZR is a gene known to affect motile cilia function.
  • The authors state that the possible relevance of these concurrent findings warrants further investigation in genetically unresolved cases.

The study supports phenotype-driven genomic analysis in genetically heterogeneous ciliopathies.

  • KS accounts for approximately 50% of PCD cases, and up to 30% of PCD cases remain genetically unresolved.
  • Studies focused specifically on KS cohorts remain limited.
  • Analysis of this KS-specific cohort demonstrated a high diagnostic yield.

What This Means

Kartagener's syndrome is a rare inherited condition in which the tiny hair-like structures (cilia) in the body don't move properly. This causes organs to be mirrored left-to-right (situs inversus), along with long-term lung damage (bronchiectasis) and sinus infections. Many cases have no known genetic cause, and few studies have focused on Kartagener's syndrome specifically. Researchers sequenced the protein-coding DNA (whole exome sequencing) of 17 adult Turkish patients with the syndrome. They found disease-related changes in several known ciliary genes, including DNAH5, DNAI1, DNAI2, DNAAF1, DNAAF3, CFAP300, and ODAD1, and some of these genetic changes had not been reported before. The overall rate of finding a genetic explanation was high. In one patient with no standard explanation, the team found changes in three other cilia-related genes (DLEC1, DNAAF9, and EZR). Whether these explain the disease is unclear and needs further study. This research suggests that focusing on patients with a clearly defined feature such as situs inversus can help genetic testing identify causes, and may help in understanding unresolved cases.

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Citation

Coskunpinar E, Sifoglu D, Tasolar F, Yildirim H, Cetinkaya E. (2026). Discovery of novel alleles in Kartagener's syndrome.. Mammalian genome : official journal of the International Mammalian Genome Society. https://doi.org/10.1007/s00335-026-10283-8