Using curated gene sets and whole-brain transcriptomics, five fundamental energy metabolic pathways show consistent divergence between primarily energy-producing and anabolic pathways across the cortex, exhibit unique relationships with cellular and laminar organization, and display distinct developmental trajectories from fetal stage to adulthood.
Key Findings
Results
Five energy metabolic pathway maps derived from whole-brain transcriptomics show consistent spatial divergence between primarily energy-producing and anabolic pathways, particularly in unimodal sensory cortices.
The five pathways mapped were glycolysis, pentose phosphate pathway (PPP), tricarboxylic acid (TCA) cycle, oxidative phosphorylation (OXPHOS), and lactate metabolism.
Curated gene sets and whole-brain transcriptomics data were used to generate the spatial maps.
Energy-producing pathways and the anabolic PPP showed consistent divergence in their regional distributions, most notably in unimodal sensory cortices.
The approach relied on spatially resolved transcriptomic data spanning the entire cortex.
Results
Energy metabolic pathway maps exhibit unique relationships with the cellular and laminar organization of the cortex.
The spatial alignment of energy pathway maps was explored against multi-scale structural and functional attributes including metabolic uptake, neurophysiological oscillations, cell type composition, laminar organization, and macro-scale connectivity.
Results point to higher energy demands of large pyramidal cells and efferent projections.
Both cell type composition and laminar structure were found to be relevant to the spatial patterning of energy pathways.
Results
Primary energy-producing pathways (glycolysis, TCA cycle, OXPHOS, lactate metabolism) peak in childhood during development.
Developmental trajectories were examined from the fetal stage to adulthood.
The primary energy-producing pathways showed peak expression in childhood before declining toward adult levels.
These trajectories were found to be distinct across the five metabolic pathways studied.
Results
The anabolic pentose phosphate pathway (PPP) shows greater prenatal expression and declines throughout life.
In contrast to the energy-producing pathways, the PPP exhibited its highest expression prenatally.
PPP expression showed a declining trajectory from the fetal stage through adulthood.
This trajectory was described as distinct from all other energy-producing pathways examined.
Results
Energy metabolic pathway maps spatially align with neurophysiological oscillations and macro-scale brain connectivity.
Spatial alignment was assessed between the five pathway maps and neurophysiological oscillations.
Macro-scale connectivity patterns were also examined in relation to the energy pathway maps.
These analyses were conducted alongside comparisons with metabolic uptake measures and cell type composition.
Pourmajidian M, Hansen J, Shafiei G, Misic B, Dagher A. (2026). Five energy metabolism pathways show distinct regional distributions and lifespan trajectories in the human brain.. PLoS biology. https://doi.org/10.1371/journal.pbio.3003619