B. fragilis activates a colonic ChAT+-nodose ganglion gut-brain cholinergic circuit to suppress seizures in mouse models and in a randomized clinical trial of pediatric refractory epilepsy.
Key Findings
Background
Bacteroides fragilis is markedly reduced in children with epilepsy compared to healthy controls.
Gut dysbiosis was identified as implicated in epilepsy, with B. fragilis specifically depleted in the pediatric epilepsy population.
The reduction was sufficient to motivate investigation of B. fragilis as a probiotic intervention.
This clinical observation formed the basis for the subsequent mechanistic and therapeutic studies.
Results
Oral B. fragilis administration suppresses seizures in pentylenetetrazole (PTZ)- and kainic-acid (KA)-induced mouse models.
Two established chemically-induced seizure mouse models were used: PTZ model and KA model.
B. fragilis was administered orally to mice prior to seizure induction.
Seizure suppression was observed in both models, establishing antiseizure efficacy across different seizure induction paradigms.
Results
B. fragilis activates colonic choline acetyltransferase-positive (ChAT+) cells and enhances gut-vagus-brain cholinergic signaling.
Mechanistic studies demonstrated activation of colonic ChAT+ cells following B. fragilis treatment.
Vagal recordings provided direct electrophysiological evidence of enhanced cholinergic signaling along the gut-vagus-brain axis.
Pharmacological blockade experiments confirmed that cholinergic signaling was required for the antiseizure effects.
Chemogenetic manipulation was used to selectively activate or inhibit components of the circuit to establish causality.
Results
A colonic ChAT+-nodose ganglion circuit was identified as the specific neural circuit mediating B. fragilis-induced seizure suppression.
The nodose ganglion, which contains cell bodies of vagal afferent neurons, was identified as a key relay in the circuit.
The circuit connects colonic ChAT+ enteroendocrine/neuronal cells to the brain via the vagus nerve.
Disruption of this circuit abolished the antiseizure effects of B. fragilis.
This finding defines a specific gut-brain cholinergic pathway for microbiota-mediated seizure control.
Results
The antiseizure effects of B. fragilis are associated with enriched intestinal Lactobacillus colonization.
Metagenomic or microbiome analyses revealed increased Lactobacillus abundance following B. fragilis treatment.
This association suggests B. fragilis may exert effects partly through modulation of the broader gut microbial community.
Lactobacillus enrichment was identified as a correlate of seizure suppression.
Results
A randomized clinical trial confirmed the therapeutic efficacy of B. fragilis in pediatric refractory epilepsy.
The trial was registered as CHiCTR2100042203.
The study population consisted of children with refractory epilepsy.
The trial design was randomized, providing controlled evidence for clinical benefit.
Results confirmed the translational relevance of the preclinical mechanistic findings.
Conclusions
These findings establish a mechanistic basis for microbiota-targeted therapies in epilepsy through a defined gut-brain cholinergic pathway.
The study integrates clinical observation, animal models, circuit-level neuroscience, and a clinical trial to define a complete mechanistic framework.
The gut-brain cholinergic pathway represents a previously uncharacterized mechanism by which a specific probiotic exerts antiseizure effects.
The authors propose this pathway as a target for future microbiota-based epilepsy therapeutics.
Jia Y, Chen H, Zou Q, Chen S, Li J, Chen Y, et al.. (2026). Gut-brain cholinergic signaling mediates the antiseizure effects of Bacteroides fragilis.. Neuron. https://doi.org/10.1016/j.neuron.2025.11.029