Gut Commensal Klebsiella pneumoniae Extracellular Vesicles Shape a Liver Microenvironment Conducive to Gut-Liver Bacterial Translocation and Pro-Tumorigenic Processes.
Tsubaki S, Nashimoto S, et al. • Journal of extracellular vesicles • 2026
Gut commensal Klebsiella pneumoniae-derived extracellular vesicles carrying two bacterial tsRNAs shape a liver microenvironment that suppresses macrophage antimicrobial functions, promotes gut-liver bacterial translocation, and may influence hepatocellular carcinoma progression.
Key Findings
Results
Two bacterial small tRNA-derived RNAs (tsRNAs) enriched in Klebsiella pneumoniae-derived EVs (KpEVs) are markedly elevated in the serum of patients with hepatocellular carcinoma (HCC).
The tsRNAs were identified as enriched specifically in KpEVs compared to other bacterial EV preparations.
Serum levels of these two tsRNAs were significantly elevated in HCC patients relative to controls.
The tsRNAs were characterized as potential biomarkers for HCC based on their elevated serum concentrations.
Results
KpEV-associated tsRNAs suppress the production of nitric oxide (NO) by macrophages, impairing a critical antitumor molecule.
NO production by macrophages was inhibited following exposure to KpEVs carrying the identified tsRNAs.
NO is described as a 'critical antitumor molecule' whose suppression may contribute to pro-tumorigenic processes.
The mechanism involved tsRNA-mediated modulation of macrophage function rather than direct bacterial action.
Results
KpEVs reach the liver more efficiently than intact bacterial cells, facilitating gut-to-liver bacterial translocation.
KpEVs demonstrated greater hepatic delivery efficiency compared to K. pneumoniae bacterial cells in experimental models.
KpEVs were found to facilitate bacterial translocation from the gut to the liver by inducing immunosuppressive macrophages.
This preferential liver accumulation of EVs over bacteria suggests EVs act as advance mediators conditioning the liver environment.
Results
KpEVs drive an M2-like macrophage phenotype that enhances phagocytosis while inhibiting antimicrobial and inflammatory killing mechanisms.
KpEV exposure induced polarization toward an M2-like macrophage phenotype.
KpEVs enhanced phagocytic activity of macrophages.
KpEVs simultaneously inhibited NO production by macrophages.
KpEVs inhibited caspase-1-dependent pyroptosis during bacterial infection, suppressing an inflammatory cell death pathway.
Results
KpEVs shape a liver microenvironment that promotes gut-liver bacterial translocation and may also influence HCC progression.
The immunosuppressive macrophage phenotype induced by KpEVs in the liver creates conditions permissive for bacterial translocation.
The liver microenvironment shaped by KpEVs is described as 'conducive to gut-liver bacterial translocation and pro-tumorigenic processes.'
The study suggests KpEVs represent a previously unrecognized strategy by which K. pneumoniae modulates host immunity of distant organs.
Conclusions
K. pneumoniae exploits EVs as a mechanism to modulate host immunity in distant organs, with tsRNAs identified as potential biomarkers and therapeutic targets.
The EV-mediated immunomodulation represents a 'previously unrecognized strategy' used by gut commensal K. pneumoniae.
tsRNAs are highlighted as 'potential biomarkers and therapeutic targets' based on their elevation in HCC patient serum and their functional role in NO suppression.
The study characterizes this as host-microbe communication mediated by bacterial EVs acting systemically beyond the gut.