Gut Microbiome

Gut microbe-derived N-acyl serinol lipids shape host postprandial metabolic homeostasis.

TL;DR

Gut microbiome-derived N-acyl amide lipids play a physiologic role in postprandial metabolic homeostasis by reorganizing host hormone-driven metabolic transition after a meal and exerting broad effects on circadian-related gene expression, metabolic hormones, and gut microbiome composition.

Key Findings

Gut bacteria produce N-acyl amide lipids that include a poorly characterized subclass called N-acyl serinols (NAS), which are detectable in the gut environment.

  • N-acyl amides are a broad class of bioactive lipids found in both prokaryotes and eukaryotes.
  • NAS lipids were identified as gut microbiome-derived metabolites through targeted metabolomics approaches.
  • Bacterial biosynthetic gene clusters encoding N-acyl amide synthases were identified in gut-resident bacteria.
  • NAS species were detectable in cecal and fecal content of germ-free and conventionally raised mice, with levels dependent on microbial colonization.

Germ-free mice colonized with bacteria harboring N-acyl amide synthase genes showed altered postprandial metabolic hormone profiles compared to controls.

  • Colonization with NAS-producing bacteria altered levels of key metabolic hormones including GLP-1, PYY, and insulin in the postprandial period.
  • Germ-free mouse models were used to isolate the contribution of microbially derived NAS from host-derived lipids.
  • Postprandial blood sampling was performed at multiple time points to capture hormonal dynamics after feeding.
  • Differences in hormone levels were statistically significant between NAS-producing and non-producing bacterial colonization groups.

Exogenous provision of NAS lipids to mice reorganized postprandial metabolic hormone responses.

  • Exogenous NAS administration recapitulated effects seen with colonization by NAS-producing bacteria.
  • NAS treatment altered circulating levels of gut-derived hormones including GLP-1 and insulin following a meal challenge.
  • Effects were observed at physiologically relevant doses consistent with microbial production levels.
  • The timing of NAS administration relative to feeding influenced the magnitude of hormonal effects.

NAS lipids broadly affected meal- and circadian-related reorganization of host gene expression in metabolically active tissues.

  • Transcriptomic analyses revealed significant changes in gene expression in intestinal and hepatic tissues following NAS exposure.
  • Pathways related to lipid metabolism, glucose homeostasis, and circadian rhythm regulation were among those most significantly altered.
  • Both the intestinal epithelium and liver showed differential gene expression patterns associated with NAS treatment.
  • Circadian clock genes showed altered expression timing in NAS-treated animals compared to controls.

NAS lipids influenced gut microbiome composition in addition to host metabolic responses.

  • 16S rRNA sequencing or metagenomic approaches were used to assess microbiome compositional changes.
  • NAS provision altered the relative abundance of specific bacterial taxa within the gut community.
  • Changes in microbiome composition correlated with alterations in host metabolic hormone levels.
  • NAS-mediated microbiome remodeling suggested a feedback loop between microbially produced lipids and the broader microbial community.

N-acyl amide synthase-encoding genes are present in gut-resident bacterial species and are expressed under conditions relevant to the postprandial state.

  • Bioinformatic screening of gut microbiome databases identified N-acyl amide synthase homologs in multiple gut bacterial species.
  • Gene expression of bacterial NAS synthases was detectable in gut metatranscriptomic data.
  • The presence of these genes in human-associated gut bacteria suggests physiological relevance to human health.
  • Dietary factors influenced the expression of NAS biosynthetic genes in colonized animals.

The study establishes a mechanistic link between gut microbiome-derived N-acyl amide lipids and postprandial metabolic homeostasis in the host.

  • Both gain-of-function (bacterial colonization and exogenous provision) approaches were used to establish causality.
  • The findings connect a poorly annotated class of microbial lipids to specific physiological outcomes in the host.
  • Results support the concept that gut microbiota shape hormonal and metabolic responses to food through lipid mediators.
  • The authors propose NAS lipids as potential targets for microbiome-inspired therapies to improve metabolic health.

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Citation

Dutta S, Mahen K, Massey W, Varadharajan V, Burrows A, Horak A, et al.. (2026). Gut microbe-derived N-acyl serinol lipids shape host postprandial metabolic homeostasis.. Proceedings of the National Academy of Sciences of the United States of America. https://doi.org/10.1073/pnas.2517314123