Gut Microbiome

Gut microbiota composition and tumor immune features in meningioma patients.

TL;DR

This study provides the first evidence of gut dysbiosis in grade I meningioma, characterized by Escherichia_Shigella dominance and depletion of immunomodulatory commensals, a signature that correlates with increased intratumoral immune infiltration and holds promise as a novel biomarker.

Key Findings

Meningioma patients exhibited significantly reduced gut microbiota alpha diversity compared to healthy controls.

  • Study included 15 treatment-naïve WHO grade I meningioma patients (MPs) and 15 healthy controls (HCs)
  • Alpha diversity was measured using the Shannon index (P = 0.026)
  • Beta diversity was also significantly distinct between groups (permutational multivariate analysis of variance, P < 0.0009)
  • Fecal samples were analyzed using 16S rRNA sequencing

Proteobacteria were markedly enriched in meningioma patients compared to healthy controls at the phylum level.

  • Proteobacteria abundance was 28.82% in MPs versus 2.46% in HCs (P = 0.001)
  • At the genus level, Escherichia_Shigella was specifically enriched at 25.95% in MPs versus 1.61% in HCs (P = 0.008)
  • Bacteroidaceae and Ruminococcaceae were depleted in MPs relative to HCs
  • LEfSe analysis identified Escherichia_Shigella as the top meningioma-enriched biomarker

Escherichia_Shigella demonstrated high diagnostic accuracy for WHO grade I meningioma detection.

  • Escherichia_Shigella achieved an area under the receiver operating characteristic curve (AUC) of 95.11%
  • The 95% confidence interval for this AUC was 86.91%–100%
  • The diagnostic model was based on the case-control sample of 15 MPs and 15 HCs

Escherichia_Shigella abundance positively correlated with intratumoral immune cell densities across multiple immune cell types.

  • Positive correlations were found between Escherichia_Shigella abundance and intratumoral MPO+ neutrophils, CD68+ macrophages, and CD3+ T cells (all P < 0.05)
  • Immune infiltrates were quantified using immunohistochemical profiling of tumor tissue
  • Ruminococcaceae showed inverse correlations with these same intratumoral immune cell densities

This study represents the first characterization of gut microbiota composition and its association with tumor immune features in meningioma patients.

  • Prior to this study, gut microbiota composition and metabolic characteristics in meningioma patients had not been previously reported
  • The study integrated 16S rRNA sequencing, clinical phenotyping, and immunohistochemical profiling in a case-control design
  • 16S rRNA sequencing data were made publicly available in the GSA database under accession number CRA027974
  • Patients were treatment-naïve at the time of sample collection, reducing confounding from prior therapy

What This Means

This research suggests that patients with a common type of brain tumor called meningioma have a distinctly different community of gut bacteria compared to healthy people. Specifically, meningioma patients had far less diversity in their gut microbiome overall, and showed a dramatic increase in a group of bacteria called Escherichia_Shigella (about 26% of their gut bacteria vs. only 1.6% in healthy controls), while beneficial bacteria like Bacteroidaceae and Ruminococcaceae were reduced. These findings came from analyzing stool samples from 15 meningioma patients and 15 healthy individuals using a technique called 16S rRNA sequencing. This research also suggests that the level of Escherichia_Shigella in a person's gut was closely linked to the degree of immune cell activity inside the tumor itself — patients with more of this bacterium had more neutrophils, macrophages, and T cells infiltrating their tumors. The pattern of gut bacteria was also highly accurate at distinguishing meningioma patients from healthy controls, with a diagnostic accuracy of about 95%, raising the possibility that gut microbiome analysis could one day serve as a non-invasive biomarker for this tumor type. This is the first study to examine gut bacteria in meningioma patients, and it opens a new line of investigation into how the gut-brain connection might influence brain tumor biology and the immune environment within tumors. While the study was small and cannot establish causation, it points to potential links between gut microbiome dysbiosis, neuroinflammation, and meningioma that warrant further investigation in larger studies.

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Citation

Yin K, Ma S, Yang J, Feng M, Zuo Y, Wang F. (2026). Gut microbiota composition and tumor immune features in meningioma patients.. Microbiology spectrum. https://doi.org/10.1128/spectrum.02485-25