Longitudinal Analysis of Mitochondrial D-Loop Methylation and Copy Number in Peripheral Blood: Epigenetic Signatures of Alzheimer's Disease Progression and Aging.
Rizzo B, Rossi M, et al. • International journal of molecular sciences • 2026
Healthy controls showed a progressive increase in D-loop methylation over time, whereas individuals converting to Alzheimer's disease exhibited a marked decrease, with an opposite trend observed for mtDNA copy number, suggesting these epigenetic alterations are associated with mitochondrial dysfunction and disease progression.
Key Findings
Results
Healthy controls showed a progressive increase in mitochondrial D-loop methylation over the eight-year longitudinal follow-up period.
75 participants were followed longitudinally over eight years
Subjects were classified into four groups according to clinical progression from healthy cognition to MCI and AD
A linear mixed-effects model was used to assess differences in methylation dynamics across groups and time points
Increased D-loop methylation in healthy controls was interpreted as a possible protective mechanism against mitochondrial dysfunction
Results
Individuals converting to Alzheimer's disease exhibited a marked decrease in mitochondrial D-loop methylation over time.
The decrease in D-loop methylation was observed longitudinally across the eight-year study period
Significant differences in methylation dynamics were detected across groups and time points using a linear mixed-effects model
Reduced D-loop methylation was associated with mitochondrial dysfunction and disease progression
The trend was opposite to that observed in healthy controls, who showed increasing methylation
Results
mtDNA copy number showed an opposite trend to D-loop methylation across groups, with increased copy number associated with AD progression.
An opposite trend between D-loop methylation and mtDNA copy number was observed across the study groups
Increased mtDNA copy number was associated with mitochondrial dysfunction and disease progression
Significant differences in mtDNA copy number were detected across groups and time points using a linear mixed-effects model
The relationship between reduced methylation and increased copy number suggests a coordinated epigenetic response during cognitive decline
Methods
The study design involved longitudinal classification of 75 participants into four clinical progression groups spanning healthy cognition, MCI, and AD.
Total sample size was 75 participants followed over eight years
Subjects were classified into four groups according to clinical progression from healthy cognition to mild cognitive impairment (MCI) and AD
Blood-derived DNA samples were used for methylation and copy number analyses
The study built on previous identification of molecular signatures associated with disease progression
Background
Mitochondrial dysfunction and impaired protein homeostasis were identified as playing crucial roles in AD onset and progression beyond amyloid and tau pathologies.
The study investigated whether epigenetic alterations of mtDNA contribute to cognitive decline
The D-loop region analyzed is the regulatory region of mtDNA
AD is described as the leading cause of dementia and is expected to markedly increase in prevalence in coming decades
The study focused specifically on the methylation status of the mtDNA regulatory D-loop region as a potential contributor to disease progression
Rizzo B, Rossi M, Ferrari R, Pellegrini E, Dragoni F, Di Gerlando R, et al.. (2026). Longitudinal Analysis of Mitochondrial D-Loop Methylation and Copy Number in Peripheral Blood: Epigenetic Signatures of Alzheimer's Disease Progression and Aging.. International journal of molecular sciences. https://doi.org/10.3390/ijms27031477